% Preprints

% Maybe MOOSE
@Article{XZheng_2025,
  author  = {Xinghai Zheng and Min Yi},
  title   = {An electro-thermo-mechanically coupled crystal plasticity model for electroplasticity},
  journal = {Acta Mechanica Solida Sinica},
  month   = jul,
  year    = 2025,
  note    = {\url{https://doi.org/10.1007/s10338-025-00630-8}}
}

% MOOSE/SAM
% SAM is in the title.
@Article{Franklin_2025b,
  author  = {Trevor Franklin and Ryan P. McGuire and Sierra Tutwiler and A. M. Coxe and Lane B. Carasik},
  title   = {{Design study of a fusion liquid immersion blanket heat exhaust/transport system using SAM}},
  journal = {Fusion Science and Technology},
  month   = jul,
  year    = 2025,
  pages   = {xx (17 pages)},
  note    = {\url{https://doi.org/10.1080/15361055.2025.2503679}}
}

% MOOSE/BISON
% "These models include ... a system-level BISON fuel performance model."
@Article{Jacobsen_2025,
  author  = {George M. Jacobsen and Chris Ellis and Joel Kosmatka and Herbert Shatoff and Panto Mijatovic and Ricardo Lebensohn and Laurent Capolungo and Kevin Spilker and Kyle Gamble and Gyanender Singh and Jason Hales and Christina A. Back},
  title   = {{Multiscale modeling of the mechanical response of silicon carbide composite within the Accelerated Fuel Qualification Framework}},
  journal = {Nuclear Technology},
  month   = may,
  year    = 2025,
  pages   = {xx (19 pages)},
  note    = {\url{https://doi.org/10.1080/00295450.2025.2480978}, Accelerated Fuel Qualification Special Issue}
}

% MOOSE/BISON/Centipede
% "We will utilize UO2 fission gas diffusion predictions from ... Centipede to inform fuel performance rodlet simulations using ... BISON ..."
@Article{Matthews_2025,
  author  = {Christopher Matthews and Michael W. D. Cooper and Pieterjan Robbe and Tiernan Casey and Khachik Sargsyan and Habib N. Najm and Giovanni Pastore and Sophie Blondel and Nick Militello and Brian Wirth and Alex Levinsky and Joshua White and Tammie Gibson and Christopher R. Stanek and David A. Andersson},
  title   = {Mechanistic multiscale uncertainty propagation in support of accelerated fuel qualification},
  journal = {Nuclear Technology},
  month   = jul,
  year    = 2025,
  pages   = {xx (13 pages)},
  note    = {\url{https://doi.org/10.1080/00295450.2025.2505811}, Accelerated Fuel Qualification Special Issue}
}

% MOOSE/Griffin
% "This work provides a demonstration of the Serpent-Griffin neutronics workflow..."
@Article{Naupa_2025,
  author  = {Isaac Naupa and Samuel Garcia and Ben Lindley and Stefano Terlizzi and Dan Kotlyar},
  title   = {{Validation and verification of Serpent-Griffin computational sequence using the SNAP 8 experimental reactor dry experiments}},
  journal = {Nuclear Science and Engineering},
  month   = may,
  year    = 2025,
  note    = {\url{https://doi.org/10.1080/00295639.2025.2483071}}
}

% Maybe MOOSE
% Requested full-text on ResearchGate
@Article{Lucero_2025,
  author  = {Catherine Lucero and W. Jason Weiss and O. Burkan Isgor},
  title   = {Carbonation potential for concrete using thermodynamic modeling for concrete sustainability calculations},
  journal = {Transportation Research Record},
  month   = may,
  year    = 2025,
  note    = {\url{https://doi.org/10.1177/03611981251331008}}
}

% Griffin
% "We compare the multiplication factor and power rate distributions between PTT simulations using the Griffin reactor physics software ..."
@Article{Carlson_2025,
  author  = {Liam Carlson and Jean C. Ragusa and Paolo Balestra and Yaqi Wang},
  title   = {{Deterministic High-Fidelity Neutronics Simulation of Pebble Bed Reactors Using Pebble Tracking Transport}},
  journal = {Nuclear Science and Engineering},
  month   = apr,
  year    = 2025,
  pages   = {xx (21 pages)},
  note    = {\url{https://doi.org/10.1080/00295639.2025.2471722}}
}

% Maybe MOOSE
% Requested full-text on ResearchGate
@Article{Ramey_2025,
  author  = {Kyle M. Ramey and Bojan Petrovic},
  title   = {{Assessment of modeling decisions for depletion multiphysics studies of AHTR}},
  journal = {Nuclear Science and Engineering},
  month   = apr,
  year    = 2025,
  note    = {\url{https://doi.org/10.1080/00295639.2025.2464460}}
}

% MOOSE
% This article was not yet assigned a page number within the volume when I found it.
% "The THM nonlinear coupled equations governing the soil freezing process are implemented using ... MOOSE ..."
@Article{Khaksar_2025,
  author  = {Kian Khaksar and Biao Li},
  title   = {Poromechanical analysis of regional frozen ground responses under heat exchanger operations},
  journal = {Canadian Geotechnical Journal},
  month   = apr,
  year    = 2025,
  volume  = 62,
  pages   = {xx (21 pages)},
  note    = {\url{https://doi.org/10.1139/cgj-2024-0464}}
}

% MOOSE
% "Sect. 2 presents the coupling mechanism of the reactive-chemo-mechanical model and the numerical implementation based on ... MOOSE ..."
@Article{Tang_2025,
  author  = {XiaoJie Tang and ManMan Hu},
  title   = {The effect of chemical environment on crack propagation in pressure-sensitive rocks},
  journal = {Rock Mechanics and Rock Engineering},
  month   = mar,
  year    = 2025,
  pages   = {xx (16 pages)},
  note    = {\url{https://doi.org/10.1007/s00603-025-04485-w}}
}

% MOOSE
% "Cahn-Hilliard Equation ... was solved using finite element method in MOOSE framework ..."
@Article{Subedi_2025,
  author  = {Upadesh Subedi and Nele Moelans and Tomasz Ta{\'{n}}ski and Anil Kunwar},
  title   = {{Foretelling microstructural interface with multi-generational convolutional-LSTM framework}},
  journal = {Engineering with Computers},
  month   = mar,
  year    = 2025,
  note    = {\url{https://doi.org/10.1007/s00366-025-02117-z}, SSRN Preprint: \url{https://doi.org/10.2139/ssrn.4486852}}
}

% MOOSE/NIsoS
% "The simulations use the transient solver ... provided by MOOSE framework..."
@Article{YYang_2025,
  author  = {Yangyiwei Yang and Xiangfeng Li and Junlong Ma and Somnath Bharech and Xiandong Zhou and Xiang-Long Peng and Bai-Xiang Xu},
  title   = {{High-throughput computational homogenization of porous materials produced by selective laser sintering: A diffuse-interface--based workflow}},
  journal = {Computational Mechanics},
  month   = mar,
  year    = 2025,
  pages   = {xx (18 pages)},
  note    = {\url{https://doi.org/10.1007/s00466-025-02610-8}}
}

% MOOSE
% "The ... (MOOSE) code framework is specifically equipped to generate training samples and create surrogate models using full-order reactor physics models."
@Article{Williams_2025,
  author  = {Quinton J. Williams and Ryan H. Stewart and Todd S. Palmer and Camille J. Palmer and Chad Pope and Ashley Shields and Christopher Ritter},
  title   = {{Selection of sampling and surrogate modeling methods for state-point evaluations of an AGN-201M reactor}},
  journal = {Nuclear Science and Engineering},
  month   = feb,
  year    = 2025,
  pages   = {xx (15 pages)},
  note    = {\url{https://doi.org/10.1080/00295639.2025.2455908}, PHYSOR 2024 Special Issue}
}

% MOOSE
@Article{Jaradat_2024c,
  author  = {Mustafa K. Jaradat and Sebastian Schunert and Frederick N. Gleicher and Mark D. DeHart},
  title   = {{Temperature prediction for the Sirius-2c nuclear propulsion fuel experiment conducted at the TREAT facility}},
  journal = {Nuclear Science and Engineering},
  month   = jan,
  year    = 2025,
  note    = {\url{https://doi.org/10.1080/00295639.2024.2445470}, PHYSOR 2024 Special Issue, Tech.~Report INL/CON-24-76205, \url{https://www.osti.gov/biblio/2341470}}
}

% MOOSE/Griffin
@Article{Hanophy_2025,
  author  = {Joshua Hanophy and Paolo Balestra and Yaqi Wang and Javier Ortensi and Sebastian Schunert},
  title   = {{Multiphysics running-in simulations for pebble-bed reactors with Griffin}},
  journal = {Nuclear Science and Engineering},
  month   = jun,
  year    = 2025,
  note    = {\url{https://doi.org/10.1080/00295639.2025.2497025}, PHYSOR 2024 Special Issue}
}

% MOOSE/Squirrel
@Article{Pfahl_2025,
  author  = {P. Pfahl and A. Chambon and J. Groth-Jensen and B. Lauritzen},
  title   = {{Squirrel: A MOOSE-based app for solving point kinetics in molten salt reactors}},
  journal = {Nuclear Science and Engineering},
  month   = jun,
  year    = 2025,
  note    = {\url{https://doi.org/10.1080/00295639.2025.2494182}, PHYSOR 2024 Special Issue}
}

% MOOSE
% "The model is numerically implemented using ... (MOOSE)..."
@Article{ZhenhuiZhang_2024,
  author  = {Zhenhui Zhang and Renjia Zhang and Shen Sun and Min Yi},
  title   = {A thermo-mechanically coupled phase-field fatigue fracture model},
  journal = {Acta Mechanica},
  month   = dec,
  year    = 2024,
  note    = {\url{https://doi.org/10.1007/s00707-024-04163-y}}
}

% Maybe MOOSE
@Article{JFang_2024,
  author  = {Jun Fang and Dillon Shaver and Paul Romano and Elia Merzari},
  title   = {Large-scale multiphysics simulations of small modular reactors operating in natural circulation},
  journal = {Nuclear Technology},
  month   = aug,
  year    = 2024,
  pages   = {xx (12 pages)},
  note    = {\url{https://doi.org/10.1080/00295450.2024.2380951}, Special Issue: Select papers from NURETH-20}
}

% MOOSE/Cardinal
% "we use the Cardinal ... (MOOSE) application ... to run coupled simulations"
% To be combined with: Leite_2023
@Article{Leite_2025,
  author  = {Victor {Coppo Leite} and Elia Merzari and April Novak and Roberto Ponciroli and Lander Ibarra},
  title   = {Application of a physics-informed convolutional neural network for monitoring the temperature fields in high-temperature gas reactors},
  journal = {Nuclear Science and Engineering},
  month   = jan,
  year    = 2025,
  note    = {\url{https://doi.org/10.1080/00295639.2024.2443337}, Special Issue: Select papers from NURETH-20}
}

% MOOSE/BlueCrab
% "Codes are coupled in-memory through the ... (MOOSE) framework ..."
@Article{Stauff_2024,
  author  = {Nicolas E. Stauff and Yinbin Miao and Yan Cao and Kun Mo and Ahmed Amin E. Abdelhameed and Lander Ibarra and Christopher Matthews and Emily R. Shemon},
  title   = {{High-fidelity multiphysics modeling of a heat pipe microreactor using BlueCrab}},
  journal = {Nuclear Science and Engineering},
  month   = aug,
  year    = 2024,
  pages   = {xx (17 pages)},
  note    = {\url{https://doi.org/10.1080/00295639.2024.2375175}, Special Issue on Microreactor Challenges}
}

% Maybe MOOSE
% https://www.researchgate.net/publication/382327116_Neural_networks_for_emergent_behavior_in_biological_microstructures
% Requested full-text on ResearchGate
% See also: Kumar_2024b where they use MOOSE
@Article{Kumar_2024,
  author  = {Manik Kumar and Joe Sgarrella and Christian Peco},
  title   = {Neural networks for emergent behavior in biological microstructures},
  journal = {Engineering Computations},
  month   = jul,
  year    = 2024,
  note    = {\url{https://doi.org/10.1108/EC-11-2023-0792}}
}

% MOOSE/SAM
@Article{Mui_2025,
  author  = {Travis Mui and Rui Hu and Quan Zhou and Thanh Hua and Ling Zou},
  title   = {{Species transport framework development in SAM for system-level tritium source term analysis}},
  journal = {Nuclear Technology},
  month   = jun,
  year    = 2025,
  pages   = {1--16},
  note    = {Selected papers from the SAM Code special issue, \url{https://doi.org/10.1080/00295450.2025.2503681}}
}

% MOOSE/SAM
@Article{Gorman_2025,
  author  = {Michael Gorman and Ling Zou and Rui Hu},
  title   = {{SAM two-phase flow model development and applications for operational transients in advanced reactors}},
  journal = {Nuclear Technology},
  month   = jun,
  year    = 2025,
  pages   = {xx (14 pages)},
  note    = {Selected papers from the SAM Code special issue, \url{https://doi.org/10.1080/00295450.2025.2496596}}
}

% MOOSE/SAM
@Article{Heald_2025,
  author  = {Alexander Heald and Floren Rubio and Haihua Zhao},
  title   = {{Development of heat transfer framework in vertical parallel plate geometry for high Prandtl number coolant and preliminary validation of mixed convection regime for FHR application}},
  journal = {Nuclear Technology},
  month   = apr,
  year    = 2025,
  pages   = {xx (19 pages)},
  note    = {Selected papers from the SAM Code special issue, \url{https://doi.org/10.1080/00295450.2025.2472520}}
}

% MOOSE/SAM
@Article{LZou_2024b,
  author  = {Ling Zou and Thanh Hua and Zhiee Jhia Ooi and Jun Fang and Rui Hu},
  title   = {{Thermal fluid modeling approaches in SAM for high temperature gas-cooled reactor applications}},
  journal = {Nuclear Technology},
  month   = oct,
  year    = 2024,
  pages   = {xx (18 pages)},
  note    = {Selected papers from the SAM Code special issue, \url{https://doi.org/10.1080/00295450.2024.2410623}}
}

% MOOSE/SAM
@Article{RHui_2024,
  author  = {Rui Hu and Ling Zou and Daniel O'Grady and Travis Mui and Zhiee Jhia Ooi and Guojun Hu and Eric Cervi and Gang Yang and David Andr{\v{s}} and Alex Lindsay and Cody Permann and Robert Salko and Quan Zhou and Lambert Fick and Alexander Heald and Haihua Zhao},
  title   = {{SAM: A modern system code for advanced non-LWR safety analysis}},
  journal = {Nuclear Technology},
  month   = oct,
  year    = 2024,
  pages   = {xx (20 pages)},
  note    = {Selected papers from the SAM Code special issue, \url{https://doi.org/10.1080/00295450.2024.2409601}}
}

% MOOSE/SAM
@Article{Leite_2024,
  author  = {Victor Coppo Leite and Elia Merzari and Ling Zou},
  title   = {{Code validation of SAM using forced and natural circulation data from NACIE-UP benchmark}},
  journal = {Nuclear Technology},
  month   = sep,
  year    = 2024,
  pages   = {xx (16 pages)},
  note    = {Selected papers from the SAM Code special issue, \url{https://doi.org/10.1080/00295450.2024.2377526}}
}

% MOOSE/SAM
@Article{LZou_2024,
  author  = {Ling Zou and Quan Zhou and Dan O'Grady and Rui Hu and Alex Heald and Haihua Zhao},
  title   = {{Verification and demonstration of one-dimensional freezing model in SAM for salt-cooled reactor analysis applications}},
  journal = {Nuclear Technology},
  month   = aug,
  year    = 2024,
  pages   = {xx (17 pages)},
  note    = {Selected papers from the SAM Code special issue, \url{https://doi.org/10.1080/00295450.2024.2377522}}
}

% MOOSE/SAM
@Article{JLi_2024,
  author  = {Jin Li and Thomas Downar and Volkan Seker and Dan O'Grady and Rui Hu and Nader Satvat and Shai Kinast},
  title   = {Neutronics and thermo-fluids simulation of generic pebble-bed fluoride-salt-cooled high-temperature reactor},
  journal = {Nuclear Technology},
  month   = aug,
  year    = 2024,
  pages   = {1--17},
  note    = {Selected papers from the SAM Code special issue, \url{https://doi.org/10.1080/00295450.2024.2381282}}
}

% MOOSE/SAM
@Article{Salko_2024,
  author  = {Robert K. Salko and Travis Mui and Ling Zou and Rui Hu},
  title   = {{Implementation of a drift flux model into SAM with development of a verification and validation test suite for modeling of noncondensable gas mixtures}},
  journal = {Nuclear Technology},
  month   = jul,
  year    = 2024,
  pages   = {1--23},
  note    = {Selected papers from the SAM Code special issue, \url{https://doi.org/10.1080/00295450.2024.2370189}}
}

% MOOSE/SAM
@Article{Cervi_2024,
  author  = {Eric Cervi and S{\'{e}}bastien Baudier and Ling Zou and Rui Hu},
  title   = {{Verification of the SAM code by means of the Method of Manufactured Solutions: Application to molten salt reactor multiphysics simulation}},
  journal = {Nuclear Technology},
  month   = jun,
  year    = 2024,
  pages   = {1--25},
  note    = {Selected papers from the SAM Code special issue, \url{https://doi.org/10.1080/00295450.2024.2338506}}
}

% MOOSE/SAM
@Article{Huxford_2024,
  author  = {Aaron Huxford and Ling Zou and Rui Hu and Victor Petrov and Annalisa Manera},
  title   = {{Validation of a hybrid domain overlapping coupling between SAM and CFD against the TALL-3D transients}},
  journal = {Nuclear Technology},
  month   = jun,
  year    = 2024,
  pages   = {1--18},
  note    = {Selected papers from the SAM Code special issue, \url{https://doi.org/10.1080/00295450.2024.2352665}}
}

% MOOSE/SAM
@Article{Fei_2024,
  author  = {Tingzhou Fei and Marek Stempniewicz and Fulvio Bertocchi and Visura Pathirana and Thanh Hua and Rui Hu and Ferry Roelofs},
  title   = {{MSR Transient Simulation and MSRE Transient Benchmark with SAM and SPECTRA}},
  journal = {Nuclear Technology},
  month   = jun,
  year    = 2024,
  pages   = {1--17},
  note    = {Selected papers from the SAM Code special issue, \url{https://doi.org/10.1080/00295450.2024.2337338}}
}
